CAPRIN1

Across TCGA patient cohorts, CAPRIN1 RNA expression is significantly associated with the RNA expression of many other genes, with 20,271 significant associations in total. ACC shows the largest number of these associations.

The most reproducible CAPRIN1-associated genes across cancer lineages are DHX9, USP37, and SCYL2. Each is linked with CAPRIN1 in more than 33 cancer types. Because this analysis shows association rather than direction, both CAPRIN1-to-partner and partner-to-CAPRIN1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CAPRIN1 versus DHX9 in ACC, with a Pearson correlation of 0.94.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CAPRIN1→partner) and Y-score (partner→CAPRIN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ACC	DHX9 →	+1.306	+1.298	<.001	<.001	3	34
DLBC	USP37 →	+1.396	+1.023	<.001	<.001	3	34
DLBC	SCYL2 →	+1.313	+0.931	<.001	<.001	3	34
DLBC	IREB2 →	+1.180	+0.976	<.001	<.001	3	34
ACC	MARCHF7 →	+1.143	+1.340	<.001	<.001	3	34
ACC	SAP130 →	+1.164	+1.274	<.001	<.001	3	34

Each partner links to its Q-omics profile. Showing the 6 strongest of 20,271 associations by consensus.

CAPRIN1 vs DHX9 — ACC

Explore this scatter interactively →