CAPN9

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CAPN9 RNA expression is significantly associated with the protein abundance of many other proteins, with 17,592 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CAPN9-associated proteins across cancer lineages are STARD10, MTARC2, and SPTBN1. Each is linked with CAPN9 in more than 6 cancer types. Because this analysis shows association rather than direction, both CAPN9-to-partner and partner-to-CAPN9 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CAPN9 versus STARD10 in BRCA, with a Pearson correlation of 0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (CAPN9→partner) and Y-score (partner→CAPN9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASTARD10 →+0.822+1.271<.001<.00137
BRCAMTARC2 →+0.524+1.173<.001<.00136
PDACSPTBN1 →+0.379+2.596<.001<.00136
GBMBCAS1 →+1.100+0.835<.001<.00136
LSCCBICD2 →-0.435-0.586<.001<.00136
HNSCDDAH1 →+0.573+0.675<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 17,592 associations by consensus.

CAPN9 vs STARD10 — BRCA

Per-sample scatter of CAPN9 vs STARD10 in BRCA (Pearson r = 0.45).

Explore this scatter interactively →

Exploration