CAPN7

RNA expression — cross-omics
Cross-omicsRNA → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CAPN7 RNA expression is significantly associated with the RNA expression of many other genes, with 21,273 significant associations in total. ACC shows the largest number of these associations.

The most reproducible CAPN7-associated genes across cancer lineages are RBSN, THUMPD3, and ROCK2. Each is linked with CAPN7 in more than 33 cancer types. Because this analysis shows association rather than direction, both CAPN7-to-partner and partner-to-CAPN7 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CAPN7 versus RBSN in SCLC, with a Pearson correlation of 0.60.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CAPN7→partner) and Y-score (partner→CAPN7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SCLCRBSN →+1.150+0.727<.001<.001334
UVMTHUMPD3 →+1.257+1.368<.001<.001334
THYMROCK2 →+1.307+1.131<.001<.001334
UVMIREB2 →+1.489+1.238<.001<.001334
KICHSTX17 →+1.404+0.993<.001<.001334
DLBCTSTD2 →+2.033+0.905<.001<.001334
Each partner links to its Q-omics profile. Showing the 6 strongest of 21,273 associations by consensus.

CAPN7 vs RBSN — SCLC

Per-sample scatter of CAPN7 vs RBSN in SCLC (Pearson r = 0.60).

Explore this scatter interactively →

Exploration