CAPN12

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CAPN12 mutation is significantly associated with the total protein of many other genes, with 26 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CAPN12-associated genes across cancer lineages are Di-Ras3, eEF2, and EGFR_pY1068. Each is linked with CAPN12 in more than 1 cancer types. Because this analysis shows association rather than direction, both CAPN12-to-partner and partner-to-CAPN12 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Di-Ras3 grouped by CAPN12-low versus CAPN12-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CAPN12→partner) and Y-score (partner→CAPN12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECDi-Ras3 →-0.134-3.308.025.00932
UCECeEF2 →+0.327+2.999.023.03531
UCECEGFR_pY1068 →-0.222-2.415.027.00331
UCECeIF4E →+0.196+3.013.020.01831
UCECERK2 →+0.171+2.321.027.03431
UCECKu80 →+0.240+1.920.011.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 26 associations by consensus.

Di-Ras3 by CAPN12 expression — UCEC

Box plot of Di-Ras3 in CAPN12-low vs CAPN12-high samples in UCEC.

Explore this box plot interactively →

Exploration