CAMK4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CAMK4 protein abundance is significantly associated with the RNA expression of many other genes, with 14,112 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible CAMK4-associated genes across cancer lineages are PTGDS, RFTN1, and TESPA1. Each is linked with CAMK4 in more than 6 cancer types. Because this analysis shows association rather than direction, both CAMK4-to-partner and partner-to-CAMK4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CAMK4 versus PTGDS in GBM, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CAMK4→partner) and Y-score (partner→CAMK4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPTGDS →+1.632+0.586<.001<.00137
UCECRFTN1 →+0.879+0.564<.001<.00137
GBMTESPA1 →+1.016+0.736<.001<.00137
HNSCITM2A →+1.012+0.371.007.00837
LSCCGRAP2 →+0.704+0.403<.001<.00136
GBMPPP1R16B →+1.420+0.713<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,112 associations by consensus.

CAMK4 vs PTGDS — GBM

Per-sample scatter of CAMK4 vs PTGDS in GBM (Pearson r = 0.39).

Explore this scatter interactively →

Exploration