CALU

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CALU protein abundance is significantly associated with the RNA expression of many other genes, with 18,129 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CALU-associated genes across cancer lineages are LGALS1, POSTN, and GPX8. Each is linked with CALU in more than 6 cancer types. Because this analysis shows association rather than direction, both CALU-to-partner and partner-to-CALU results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CALU versus LGALS1 in LSCC, with a Pearson correlation of 0.59.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CALU→partner) and Y-score (partner→CALU) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCLGALS1 →+0.918+0.372<.001<.00137
GBMPOSTN →+2.497+0.440.002.00237
GBMGPX8 →+1.148+0.482<.001<.00137
BRCACTHRC1 →+1.178+0.494<.001<.00137
GBMTMEM45A →+1.030+0.517<.001<.00137
GBMLINC01614 →+1.302+0.552<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 18,129 associations by consensus.

CALU vs LGALS1 — LSCC

Per-sample scatter of CALU vs LGALS1 in LSCC (Pearson r = 0.59).

Explore this scatter interactively →

Exploration