CALN1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CALN1 mutation is significantly associated with the total protein of many other genes, with 24 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CALN1-associated genes across cancer lineages are STAT3_pY705, p27_pT157, and ACC1. Each is linked with CALN1 in more than 2 cancer types. Because this analysis shows association rather than direction, both CALN1-to-partner and partner-to-CALN1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, STAT3_pY705 grouped by CALN1-low versus CALN1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CALN1→partner) and Y-score (partner→CALN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSTAT3_pY705 →-0.297-1.574<.001.03433
LUSCp27_pT157 →+0.087+3.027.025.01832
UCECACC1 →+0.350+2.235.003.00532
UCECJNK2 →+0.223+3.727<.001<.00132
UCECTFRC →+0.451+2.000.010.02932
UCECASNS →+0.257+1.584.030.03432
Each partner links to its Q-omics profile. Showing the 6 strongest of 24 associations by consensus.

STAT3_pY705 by CALN1 expression — UCEC

Box plot of STAT3_pY705 in CALN1-low vs CALN1-high samples in UCEC.

Explore this box plot interactively →

Exploration