CALHM6

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CALHM6 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible CALHM6-associated genes across cancer lineages are OR11H1, TMEM207, and OR4D10. Each is linked with CALHM6 in more than 1 cancer types. Because this analysis shows association rather than direction, both CALHM6-to-partner and partner-to-CALHM6 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CALHM6→partner) and Y-score (partner→CALHM6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADOR11H1 →+0.022+4.371<.001.00531
LUNG_NSCLC_LUADTMEM207 →+0.072+5.472.003<.00131
LUNG_NSCLC_LUADOR4D10 →+0.039+4.662<.001.00531
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Exploration