CALCR

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CALCR RNA expression is significantly associated with the go_rna of many other GO terms, with 831 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible CALCR-associated GO terms across cancer lineages are Amylin receptor 3 signaling pathway, Positive regulation of post-translational protein modification, and Process utilizing autophagic mechanism. Each is linked with CALCR in more than 14 cancer types. Because this analysis shows association rather than direction, both CALCR-to-partner and partner-to-CALCR results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Amylin receptor 3 signaling pathway grouped by CALCR-low versus CALCR-high in BREAST.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CALCR→partner) and Y-score (partner→CALCR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTAmylin receptor 3 signaling pathway →+0.494+0.823<.001.001315
LUNG_NSCLC_LUADPositive regulation of post-translational protein modification →+0.032+0.180<.001.00635
LUNG_NSCLC_LUADProcess utilizing autophagic mechanism →+0.035+0.246<.001.00335
LUNG_NSCLC_LUADAutophagy →+0.035+0.246<.001.00335
KIDNEYProteasomal ubiquitin-independent protein catabolic process →+0.088+0.553<.001.00134
LUNG_NSCLC_LUADMacroautophagy →+0.035+0.275<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 831 associations by consensus.

Amylin receptor 3 signaling pathway by CALCR expression — BREAST

Box plot of Amylin receptor 3 signaling pathway in CALCR-low vs CALCR-high samples in BREAST.

Explore this box plot interactively →

Exploration