CALCP

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CALCP RNA expression is significantly associated with the go_rna of many other GO terms, with 4,080 significant associations in total. STAD shows the largest number of these associations.

The most reproducible CALCP-associated GO terms across cancer lineages are Protein homooligomerization, Maintenance of location in cell, and Response to ionizing radiation. Each is linked with CALCP in more than 4 cancer types. Because this analysis shows association rather than direction, both CALCP-to-partner and partner-to-CALCP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein homooligomerization grouped by CALCP-low versus CALCP-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CALCP→partner) and Y-score (partner→CALCP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
ESCAProtein homooligomerization →+0.126+0.043<.001.00335
LUSCMaintenance of location in cell →+0.096+0.022<.001.00134
STADResponse to ionizing radiation →+0.118+0.061<.001.00634
ESCAInterferon-beta production →+0.186+0.030<.001.00434
STADRegulation of peptidyl-serine phosphorylation →+0.074+0.058<.001<.00134
ESCALipoprotein catabolic process →+0.173+0.034<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,080 associations by consensus.

Protein homooligomerization by CALCP expression — ESCA

Box plot of Protein homooligomerization in CALCP-low vs CALCP-high samples in ESCA.

Explore this box plot interactively →

Exploration