CALCOCO1

Across TCGA patient cohorts, CALCOCO1 protein abundance is significantly associated with the RNA expression of many other genes, with 6,380 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CALCOCO1-associated genes across cancer lineages are SLC6A12, PDE1B, and ARRB1. Each is linked with CALCOCO1 in more than 3 cancer types. Because this analysis shows association rather than direction, both CALCOCO1-to-partner and partner-to-CALCOCO1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CALCOCO1 versus SLC6A12 in UCEC, with a Pearson correlation of 0.47.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CALCOCO1→partner) and Y-score (partner→CALCOCO1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	SLC6A12 →	+1.137	+0.324	.001	<.001	3	4
UCEC	PDE1B →	+0.715	+0.326	<.001	<.001	3	4
BRCA	ARRB1 →	+0.877	+0.293	<.001	.003	3	4
UCEC	CYRIA →	+0.893	+0.386	<.001	<.001	3	4
LUAD	LGALS2 →	+0.879	+0.219	<.001	.003	3	3
GBM	PPP1R16B →	+1.298	+0.326	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,380 associations by consensus.

CALCOCO1 vs SLC6A12 — UCEC

Explore this scatter interactively →