CACNB1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CACNB1 mutation is significantly associated with the RNA expression of many other genes, with 41 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible CACNB1-associated genes across cancer lineages are C7, SLITRK3, and MMP24. Each is linked with CACNB1 in more than 1 cancer types. Because this analysis shows association rather than direction, both CACNB1-to-partner and partner-to-CACNB1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C7 grouped by CACNB1-low versus CACNB1-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CACNB1→partner) and Y-score (partner→CACNB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaC7 →+0.261+2.829.001.00531
BLOOD_LeukemiaSLITRK3 →+0.020+2.967<.001.00331
BLOOD_LeukemiaMMP24 →+0.122+3.328.006.00931
BLOOD_LeukemiaBTBD16 →+0.048+3.181.004.00131
BLOOD_LeukemiaSYT14 →+0.018+3.947.004.00531
BLOOD_LeukemiaNPFFR1 →+0.008+3.037.003.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 41 associations by consensus.

C7 by CACNB1 expression — BLOOD_Leukemia

Box plot of C7 in CACNB1-low vs CACNB1-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration