CA4

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, CA4 RNA expression is significantly associated with the go_rna of many other GO terms, with 553 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible CA4-associated GO terms across cancer lineages are Determination of dorsal/ventral asymmetry, Negative regulation of dendrite development, and Negative regulation of epithelial cell migration. Each is linked with CA4 in more than 4 cancer types. Because this analysis shows association rather than direction, both CA4-to-partner and partner-to-CA4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Determination of dorsal/ventral asymmetry grouped by CA4-low versus CA4-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (CA4→partner) and Y-score (partner→CA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYDetermination of dorsal/ventral asymmetry →-0.161-0.212.006.00935
SOFT_TISSUENegative regulation of dendrite development →-0.140-0.894.003.00234
OVARYNegative regulation of epithelial cell migration →+0.080+0.184<.001.00525
UPPER_AERODIGESTIVE_TRACTProtein polyubiquitination →+0.051+0.033<.001<.00134
BONENonassociative learning →+1.230+0.199.001.00434
OVARYPositive regulation of growth →-0.034-0.217.002.00734
Each partner links to its Q-omics profile. Showing the 6 strongest of 553 associations by consensus.

Determination of dorsal/ventral asymmetry by CA4 expression — OVARY

Box plot of Determination of dorsal/ventral asymmetry in CA4-low vs CA4-high samples in OVARY.

Explore this box plot interactively →

Exploration