CA10

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CA10 mutation is significantly associated with the RNA expression of many other genes, with 1,301 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible CA10-associated genes across cancer lineages are SEC13, ISL2, and TIMM44. Each is linked with CA10 in more than 2 cancer types. Because this analysis shows association rather than direction, both CA10-to-partner and partner-to-CA10 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SEC13 grouped by CA10-low versus CA10-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CA10→partner) and Y-score (partner→CA10) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSEC13 →+0.354+2.617.001.00533
UCECISL2 →+0.564+2.850<.001.00133
UCECTIMM44 →+0.348+1.839.001.00233
UCECUBE2S →+0.635+3.700.002.00133
UCECCMC1 →+0.299+2.343.004.00333
SKCMTLE6 →+0.504+1.786<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,301 associations by consensus.

SEC13 by CA10 expression — UCEC

Box plot of SEC13 in CA10-low vs CA10-high samples in UCEC.

Explore this box plot interactively →

Exploration