C9orf152

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C9orf152 mutation is significantly associated with the RNA expression of many other genes, with 1,640 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible C9orf152-associated genes across cancer lineages are TRAJ31, RNU7-119P, and LINC02791. Each is linked with C9orf152 in more than 1 cancer types. Because this analysis shows association rather than direction, both C9orf152-to-partner and partner-to-C9orf152 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C9orf152→partner) and Y-score (partner→C9orf152) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADTRAJ31 →+1.292+4.085<.001.00532
COADRNU7-119P →+0.718+5.136<.001.00232
SKCMLINC02791 →+0.031+4.643<.001.00232
HNSCMIR3683 →+0.398+7.954<.001.00832
SKCMSH3GL1 →+0.674+3.359<.001.00432
UCECFAM32DP →+0.122+4.075<.001.00732
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,640 associations by consensus.

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