C7

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C7 mutation is significantly associated with the RNA expression of many other genes, with 5,041 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C7-associated genes across cancer lineages are HELLS, E2F2, and WDR76. Each is linked with C7 in more than 4 cancer types. Because this analysis shows association rather than direction, both C7-to-partner and partner-to-C7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, HELLS grouped by C7-low versus C7-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C7→partner) and Y-score (partner→C7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECHELLS →+0.360+1.369.008.00935
LUADE2F2 →+0.827+3.368<.001.00434
UCECWDR76 →+0.734+2.099<.001<.00134
LUADOIP5 →+0.786+2.150<.001.00934
UCECMASTL →+0.381+2.083.004<.00134
UCECWRAP53 →+0.276+1.408.009.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,041 associations by consensus.

HELLS by C7 expression — UCEC

Box plot of HELLS in C7-low vs C7-high samples in UCEC.

Explore this box plot interactively →

Exploration