C6orf89

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C6orf89 protein abundance is significantly associated with the RNA expression of many other genes, with 4,886 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible C6orf89-associated genes across cancer lineages are DERL1, TATDN1, and ATP6V1C1. Each is linked with C6orf89 in more than 3 cancer types. Because this analysis shows association rather than direction, both C6orf89-to-partner and partner-to-C6orf89 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C6orf89→partner) and Y-score (partner→C6orf89) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADDERL1 →+0.511+0.452<.001<.00134
OVTATDN1 →+0.656+0.570<.001<.00134
OVATP6V1C1 →+0.716+0.539<.001<.00134
OVNTAQ1 →+0.608+0.462.001.00334
LUADVPS28 →+0.530+0.473<.001<.00134
OVLAPTM4B →+1.526+0.556<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,886 associations by consensus.

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