C5orf34

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, C5orf34 mutation is significantly associated with the mutation status of many other genes, with 723 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible C5orf34-associated genes across cancer lineages are NID1, NINL, and GPR149. Each is linked with C5orf34 in more than 2 cancer types. Because this analysis shows association rather than direction, both C5orf34-to-partner and partner-to-C5orf34 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NID1 grouped by C5orf34-low versus C5orf34-high in STOMACH.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C5orf34→partner) and Y-score (partner→C5orf34) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHNID1 →+3.357+4.285.005.00513
LUNG_NSCLC_LUADNINL →+4.000+4.303.001.00113
LUNG_NSCLC_LUADGPR149 →+5.584+4.924<.001<.00112
LUNG_NSCLC_LUADASTL →+5.000+4.187.008.00812
LUNG_NSCLC_LUADANKRD13B →+5.000+4.187.008.00812
LUNG_NSCLC_LUADCASTOR1 →+5.000+4.187.008.00812
Each partner links to its Q-omics profile. Showing the 6 strongest of 723 associations by consensus.

NID1 by C5orf34 expression — STOMACH

Box plot of NID1 in C5orf34-low vs C5orf34-high samples in STOMACH.

Explore this box plot interactively →

Exploration