C4orf54

Across TCGA cell cohorts, C4orf54 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,362 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible C4orf54-associated GO terms across cancer lineages are Viral process, Protein targeting to ER, and Photoreceptor cell maintenance. Each is linked with C4orf54 in more than 7 cancer types. Because this analysis shows association rather than direction, both C4orf54-to-partner and partner-to-C4orf54 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Viral process grouped by C4orf54-low versus C4orf54-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (C4orf54→partner) and Y-score (partner→C4orf54) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BONE	Viral process →	+0.096	+0.070	<.001	.003	3	8
BREAST	Protein targeting to ER →	+0.075	+0.081	.001	.009	3	7
LARGE_INTESTINE	Photoreceptor cell maintenance →	-0.071	-0.020	<.001	.008	3	7
BREAST	Sodium ion transmembrane transport →	-0.041	-0.105	<.001	.005	3	7
URINARY_TRACT	Positive regulation of response to cytokine stimulus →	+0.092	+0.060	<.001	.009	3	7
BONE	Negative regulation of response to endoplasmic reticulum stress →	+0.126	+0.092	<.001	.003	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,362 associations by consensus.

Viral process by C4orf54 expression — BONE

Explore this box plot interactively →