C4orf33

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, C4orf33 mutation is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible C4orf33-associated genes across cancer lineages are GHRHR, MAGEB4, and CPLX4. Each is linked with C4orf33 in more than 1 cancer types. Because this analysis shows association rather than direction, both C4orf33-to-partner and partner-to-C4orf33 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GHRHR grouped by C4orf33-low versus C4orf33-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C4orf33→partner) and Y-score (partner→C4orf33) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEGHRHR →+0.060+4.054.001.00431
LARGE_INTESTINEMAGEB4 →+0.019+5.000<.001<.00131
LARGE_INTESTINECPLX4 →+0.024+4.392.004.00431
LARGE_INTESTINEOR5M11 →+0.132+4.095<.001.00331
LARGE_INTESTINEFAM205A →+0.023+3.614<.001.00611
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

GHRHR by C4orf33 expression — LARGE_INTESTINE

Box plot of GHRHR in C4orf33-low vs C4orf33-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration