C4orf3

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C4orf3 mutation is significantly associated with the immune_cell of many other genes, with 1 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C4orf3-associated genes across cancer lineages are CD4+ Tem. Each is linked with C4orf3 in more than 1 cancer types. Because this analysis shows association rather than direction, both C4orf3-to-partner and partner-to-C4orf3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CD4+ Tem grouped by C4orf3-low versus C4orf3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C4orf3→partner) and Y-score (partner→C4orf3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCD4+ Tem →+0.032+3.759<.001<.00131
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

CD4+ Tem by C4orf3 expression — UCEC

Box plot of CD4+ Tem in C4orf3-low vs C4orf3-high samples in UCEC.

Explore this box plot interactively →

Exploration