C3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C3 RNA expression is significantly associated with the protein abundance of many other proteins, with 23,917 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible C3-associated proteins across cancer lineages are MNDA, ARHGAP30, and ITGAL. Each is linked with C3 in more than 7 cancer types. Because this analysis shows association rather than direction, both C3-to-partner and partner-to-C3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C3 versus MNDA in GBM, with a Pearson correlation of 0.57.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (C3→partner) and Y-score (partner→C3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMNDA →+0.923+0.993<.001<.00138
GBMARHGAP30 →+0.748+1.312<.001<.00138
GBMITGAL →+0.625+1.358<.001<.00137
GBMMYO1G →+0.809+1.210<.001<.00137
OVACAP1_T739 →+0.843+1.925.002.00237
GBMARHGAP9 →+0.580+1.183<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 23,917 associations by consensus.

C3 vs MNDA — GBM

Per-sample scatter of C3 vs MNDA in GBM (Pearson r = 0.57).

Explore this scatter interactively →

Exploration