C2CD3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C2CD3 protein abundance is significantly associated with the RNA expression of many other genes, with 2,605 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C2CD3-associated genes across cancer lineages are SNORD104, CDC25B, and KIF21B. Each is linked with C2CD3 in more than 1 cancer types. Because this analysis shows association rather than direction, both C2CD3-to-partner and partner-to-C2CD3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C2CD3 versus SNORD104 in BRCA, with a Pearson correlation of 0.18.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C2CD3→partner) and Y-score (partner→C2CD3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASNORD104 →+0.731+0.212.008.00532
CCRCCCDC25B →-0.761-0.680<.001<.00132
CCRCCKIF21B →-0.698-0.564.002<.00132
CCRCCZC3H12D →-0.565-0.481<.001<.00132
CCRCCPRF1 →-0.677-0.348.003.00532
CCRCCARHGAP30 →-0.810-0.477<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,605 associations by consensus.

C2CD3 vs SNORD104 — BRCA

Per-sample scatter of C2CD3 vs SNORD104 in BRCA (Pearson r = 0.18).

Explore this scatter interactively →

Exploration