C22orf42

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C22orf42 mutation is significantly associated with the RNA expression of many other genes, with 330 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible C22orf42-associated genes across cancer lineages are MIR8075, RNA5SP531, and MIR4752. Each is linked with C22orf42 in more than 1 cancer types. Because this analysis shows association rather than direction, both C22orf42-to-partner and partner-to-C22orf42 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C22orf42→partner) and Y-score (partner→C22orf42) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR8075 →+1.007+3.086.001.00332
SKCMRNA5SP531 →+0.078+4.321<.001.00332
LUADMIR4752 →+0.338+5.584<.001.00232
SKCMACTN1-AS1 →+0.274+2.925<.001.00132
UCECRNU6-541P →+0.552+3.960<.001<.00132
SKCMFAM50A →+0.449+4.019<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 330 associations by consensus.

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