C1R

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, C1R mutation is significantly associated with the RNA expression of many other genes, with 11 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible C1R-associated genes across cancer lineages are OR2D3, CEACAM16, and PDE6C. Each is linked with C1R in more than 1 cancer types. Because this analysis shows association rather than direction, both C1R-to-partner and partner-to-C1R results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR2D3 grouped by C1R-low versus C1R-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C1R→partner) and Y-score (partner→C1R) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEOR2D3 →+0.018+2.832.002.00231
LARGE_INTESTINECEACAM16 →+0.050+2.648.002.00831
LARGE_INTESTINEPDE6C →+0.208+3.273.004.00631
BLOOD_LeukemiaC20orf85 →+0.042+4.969<.001.00331
BLOOD_LeukemiaSOX14 →+0.007+5.269<.001<.00131
BLOOD_LeukemiaMUC7 →+0.223+4.152<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 11 associations by consensus.

OR2D3 by C1R expression — LARGE_INTESTINE

Box plot of OR2D3 in C1R-low vs C1R-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration