C1QTNF4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C1QTNF4 mutation is significantly associated with the total protein of many other genes, with 10 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C1QTNF4-associated genes across cancer lineages are NF2, PDK1, and AMPK_pT172. Each is linked with C1QTNF4 in more than 1 cancer types. Because this analysis shows association rather than direction, both C1QTNF4-to-partner and partner-to-C1QTNF4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NF2 grouped by C1QTNF4-low versus C1QTNF4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C1QTNF4→partner) and Y-score (partner→C1QTNF4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNF2 →+0.345+3.169.002.01931
UCECPDK1 →+0.111+3.321.049.01031
UCECAMPK_pT172 →+0.487+2.183.023.03531
UCECTIGAR →+0.230+2.196.004.03431
UCECFibronectin →-0.386-3.160.025.01921
UCECp62 Lck ligand →+0.502+2.817.003.03621
Each partner links to its Q-omics profile. Showing the 6 strongest of 10 associations by consensus.

NF2 by C1QTNF4 expression — UCEC

Box plot of NF2 in C1QTNF4-low vs C1QTNF4-high samples in UCEC.

Explore this box plot interactively →

Exploration