C1QTNF2

Across TCGA patient cohorts, C1QTNF2 mutation is significantly associated with the RNA expression of many other genes, with 2,402 significant associations in total. STAD shows the largest number of these associations.

The most reproducible C1QTNF2-associated genes across cancer lineages are NPLP1, WASHC3P1, and LINC01784. Each is linked with C1QTNF2 in more than 2 cancer types. Because this analysis shows association rather than direction, both C1QTNF2-to-partner and partner-to-C1QTNF2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, NPLP1 grouped by C1QTNF2-low versus C1QTNF2-high in LIHC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C1QTNF2→partner) and Y-score (partner→C1QTNF2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LIHC	NPLP1 →	+0.128	+3.776	<.001	.007	3	3
STAD	WASHC3P1 →	+0.390	+4.991	<.001	<.001	3	3
STAD	LINC01784 →	+0.248	+3.682	<.001	.005	3	3
STAD	RNA5SP436 →	+0.559	+4.151	<.001	.001	3	3
STAD	RNU6-557P →	+1.025	+4.433	<.001	.001	3	3
STAD	IGHVII-44-2 →	+0.206	+3.505	<.001	.008	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,402 associations by consensus.

NPLP1 by C1QTNF2 expression — LIHC

Explore this box plot interactively →