C1GALT1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, C1GALT1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,948 significant associations in total. BONE shows the largest number of these associations.

The most reproducible C1GALT1-associated GO terms across cancer lineages are Cellular response to environmental stimulus, Cellular response to abiotic stimulus, and Protein folding in endoplasmic reticulum. Each is linked with C1GALT1 in more than 11 cancer types. Because this analysis shows association rather than direction, both C1GALT1-to-partner and partner-to-C1GALT1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cellular response to environmental stimulus grouped by C1GALT1-low versus C1GALT1-high in BONE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (C1GALT1→partner) and Y-score (partner→C1GALT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONECellular response to environmental stimulus →+0.047+1.877.003<.001312
BONECellular response to abiotic stimulus →+0.047+1.877.003<.001312
PANCREASProtein folding in endoplasmic reticulum →+0.140+1.024<.001.004311
BONEL-tryptophan metabolic process →-0.207-1.384<.001<.001311
BONEL-amino acid metabolic process →-0.064-1.269.002.001311
LARGE_INTESTINEPositive regulation of ATP-dependent activity →+0.091+0.805.001.001311
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,948 associations by consensus.

Cellular response to environmental stimulus by C1GALT1 expression — BONE

Box plot of Cellular response to environmental stimulus in C1GALT1-low vs C1GALT1-high samples in BONE.

Explore this box plot interactively →

Exploration