C19orf54

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C19orf54 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,474 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible C19orf54-associated proteins across cancer lineages are SF3B3, SNRPD3, and MPRIP_S301. Each is linked with C19orf54 in more than 4 cancer types. Because this analysis shows association rather than direction, both C19orf54-to-partner and partner-to-C19orf54 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (C19orf54→partner) and Y-score (partner→C19orf54) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSF3B3 →+0.221+0.410<.001<.00135
PDACSNRPD3 →+0.379+0.313.004.00534
OVMPRIP_S301 →-0.602-1.539.009.00534
GBMBOD1L1_S3029 →+0.285+0.400<.001<.00134
PDACC19orf47 →+0.382+0.427.001.00134
HNSCC1orf35 →+0.383+0.689<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,474 associations by consensus.

Exploration