C19orf54

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, C19orf54 RNA expression is significantly associated with the go_rna of many other GO terms, with 3,317 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible C19orf54-associated GO terms across cancer lineages are Regulation of ATPase-coupled calcium transmembrane transporter activity, Regulation of chromatin organization, and Positive regulation of DNA recombination. Each is linked with C19orf54 in more than 13 cancer types. Because this analysis shows association rather than direction, both C19orf54-to-partner and partner-to-C19orf54 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (C19orf54→partner) and Y-score (partner→C19orf54) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIVERRegulation of ATPase-coupled calcium transmembrane transporter activity →-0.261-0.712.001.006314
BONERegulation of chromatin organization →+0.080+0.414.001.006312
BONEPositive regulation of DNA recombination →+0.092+0.606.002<.001311
BONEMitotic DNA damage checkpoint signaling →+0.098+0.610.002<.001310
URINARY_TRACTmRNA transport →+0.080+0.858<.001.002310
BONEmRNA alternative polyadenylation →+0.076+0.602.001<.001210
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,317 associations by consensus.

Exploration