C18orf21

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C18orf21 protein abundance is significantly associated with the RNA expression of many other genes, with 2,747 significant associations in total. GBM shows the largest number of these associations.

The most reproducible C18orf21-associated genes across cancer lineages are LONRF3, CSRP3-AS1, and SLC9B2. Each is linked with C18orf21 in more than 2 cancer types. Because this analysis shows association rather than direction, both C18orf21-to-partner and partner-to-C18orf21 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C18orf21 versus LONRF3 in UCEC, with a Pearson correlation of -0.29.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C18orf21→partner) and Y-score (partner→C18orf21) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECLONRF3 →-0.911-0.251<.001.00333
COADCSRP3-AS1 →-0.645-0.531.002.00432
BRCASLC9B2 →-0.512-0.437.002<.00132
LUADNUBP1 →-0.296-0.292<.001.00732
GBMKCNJ3 →-1.154-0.335.007.00432
LUADZNRF2 →-0.418-0.386<.001.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,747 associations by consensus.

C18orf21 vs LONRF3 — UCEC

Per-sample scatter of C18orf21 vs LONRF3 in UCEC (Pearson r = -0.29).

Explore this scatter interactively →

Exploration