C17orf78

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C17orf78 mutation is significantly associated with the RNA expression of many other genes, with 619 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible C17orf78-associated genes across cancer lineages are RNA5SP248, MIR1291, and OR2AP1. Each is linked with C17orf78 in more than 1 cancer types. Because this analysis shows association rather than direction, both C17orf78-to-partner and partner-to-C17orf78 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP248 grouped by C17orf78-low versus C17orf78-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C17orf78→partner) and Y-score (partner→C17orf78) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP248 →+0.365+2.334<.001.00332
UCECMIR1291 →+0.796+3.721<.001<.00131
UCECOR2AP1 →+0.040+2.977.007.00931
UCECFCER1A →-0.908-3.700.002.00131
UCECTMEM150B →+1.017+3.353<.001.00531
UCECCCDC43 →+0.515+2.617.009.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 619 associations by consensus.

RNA5SP248 by C17orf78 expression — UCEC

Box plot of RNA5SP248 in C17orf78-low vs C17orf78-high samples in UCEC.

Explore this box plot interactively →

Exploration