C16orf54

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C16orf54 protein abundance is significantly associated with the RNA expression of many other genes, with 4,061 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible C16orf54-associated genes across cancer lineages are CLMP, LINC00996, and PES1. Each is linked with C16orf54 in more than 2 cancer types. Because this analysis shows association rather than direction, both C16orf54-to-partner and partner-to-C16orf54 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C16orf54→partner) and Y-score (partner→C16orf54) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCCLMP →+1.779+0.761<.001<.00133
LUADLINC00996 →+0.590+0.433<.001.00833
GBMPES1 →-0.483-1.036<.001<.00132
LSCCJOSD1 →-0.575-0.366<.001.00932
GBMDNAL4 →-0.572-0.878<.001.00132
GBMTTLL1 →-0.635-0.896.008.00432
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,061 associations by consensus.

Exploration