C12orf65

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C12orf65 protein abundance is significantly associated with the RNA expression of many other genes, with 5,699 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible C12orf65-associated genes across cancer lineages are PEAR1, TRAV3, and MIR145. Each is linked with C12orf65 in more than 2 cancer types. Because this analysis shows association rather than direction, both C12orf65-to-partner and partner-to-C12orf65 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, C12orf65 versus PEAR1 in LSCC, with a Pearson correlation of -0.38.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C12orf65→partner) and Y-score (partner→C12orf65) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPEAR1 →-0.627-0.357<.001.00133
OVTRAV3 →-0.884-0.963.004.00233
OVMIR145 →-1.495-0.873.003.00333
BRCAMINCR →+1.146+0.379<.001<.00133
OVIFITM2 →-1.480-1.123.003<.00133
OVPPP6R2 →-0.426-0.617.008.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,699 associations by consensus.

C12orf65 vs PEAR1 — LSCC

Per-sample scatter of C12orf65 vs PEAR1 in LSCC (Pearson r = -0.38).

Explore this scatter interactively →

Exploration