C11orf54

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, C11orf54 protein abundance is significantly associated with the RNA expression of many other genes, with 11,865 significant associations in total. GBM shows the largest number of these associations.

The most reproducible C11orf54-associated genes across cancer lineages are BTD, KBTBD3, and KPNA2. Each is linked with C11orf54 in more than 5 cancer types. Because this analysis shows association rather than direction, both C11orf54-to-partner and partner-to-C11orf54 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (C11orf54→partner) and Y-score (partner→C11orf54) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCABTD →+0.573+0.274<.001.00436
CCRCCKBTBD3 →+0.426+0.387.001.00236
BRCAKPNA2 →-0.859-0.427<.001<.00136
LUADCDKN3 →-0.741-0.306<.001<.00135
BRCACENPI →-0.822-0.301<.001.00335
BRCACCNE1 →-1.314-0.299<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,865 associations by consensus.

Exploration