BTF3

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BTF3 mutation is significantly associated with the total protein of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BTF3-associated genes across cancer lineages are VHL, p62 Lck ligand, and Cyclin-B1. Each is linked with BTF3 in more than 1 cancer types. Because this analysis shows association rather than direction, both BTF3-to-partner and partner-to-BTF3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VHL grouped by BTF3-low versus BTF3-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BTF3→partner) and Y-score (partner→BTF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECVHL →-1.320-3.169<.001.01932
UCECp62 Lck ligand →+0.340+3.009.046.01931
UCECCyclin-B1 →+0.688+3.321.019.01031
UCECNotch1 →+0.240+3.321.001.01011
UCECCaspase-8 →-0.322-3.321.014.01011
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

VHL by BTF3 expression — UCEC

Box plot of VHL in BTF3-low vs BTF3-high samples in UCEC.

Explore this box plot interactively →

Exploration