Across TCGA pan-cancer cohorts, BTBD2 mass-spec protein differs between tumor and matched normal tissue in 4 of 18 cancer types tested, making tumor–normal expression one of BTBD2’s most consistent transcriptional readouts.
The strongest signal is observed in lung squamous cell carcinoma (LSCC), where BTBD2 mass-spec protein is more highly expressed in tumor relative to normal tissue. In most cancer types BTBD2 is over-expressed in tumor, although a few such as HNSC and PDAC show the opposite, repressed pattern.
LSCC, LUAD, and HNSC are the cancer types where BTBD2 tumor–normal differential expression is most reproducible.