BSPRY

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BSPRY mutation is significantly associated with the RNA expression of many other genes, with 1,120 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BSPRY-associated genes across cancer lineages are SNORD30, PEX13, and GATD1. Each is linked with BSPRY in more than 1 cancer types. Because this analysis shows association rather than direction, both BSPRY-to-partner and partner-to-BSPRY results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNORD30 grouped by BSPRY-low versus BSPRY-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BSPRY→partner) and Y-score (partner→BSPRY) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECSNORD30 →+1.243+3.126<.001.00132
UCECPEX13 →+0.593+3.721.001<.00132
UCECGATD1 →+0.687+3.617<.001.00132
UCECALDH18A1 →+0.518+3.202.009.00932
UCECPMS2P7 →+0.154+3.202.006.00932
UCECMCPH1-AS1 →+0.434+3.467<.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,120 associations by consensus.

SNORD30 by BSPRY expression — UCEC

Box plot of SNORD30 in BSPRY-low vs BSPRY-high samples in UCEC.

Explore this box plot interactively →

Exploration