BSPRY

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, BSPRY mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible BSPRY-associated genes across cancer lineages are ASCL3, OR2D3, and TAS2R41. Each is linked with BSPRY in more than 1 cancer types. Because this analysis shows association rather than direction, both BSPRY-to-partner and partner-to-BSPRY results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASCL3 grouped by BSPRY-low versus BSPRY-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BSPRY→partner) and Y-score (partner→BSPRY) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEASCL3 →+0.207+3.726<.001.00431
LARGE_INTESTINEOR2D3 →+0.022+3.510.001.00331
LARGE_INTESTINETAS2R41 →+0.028+3.345.002.00731
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

ASCL3 by BSPRY expression — LARGE_INTESTINE

Box plot of ASCL3 in BSPRY-low vs BSPRY-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration