BSDC1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BSDC1 protein abundance is significantly associated with the RNA expression of many other genes, with 8,816 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible BSDC1-associated genes across cancer lineages are PSMB2, ZBTB8OS, and CLPTM1L. Each is linked with BSDC1 in more than 7 cancer types. Because this analysis shows association rather than direction, both BSDC1-to-partner and partner-to-BSDC1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BSDC1 versus PSMB2 in OV, with a Pearson correlation of 0.27.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BSDC1→partner) and Y-score (partner→BSDC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVPSMB2 →+0.424+0.427.004.00118
OVZBTB8OS →+0.513+0.426<.001.00336
LUADCLPTM1L →+0.428+0.186<.001<.00135
LUADPEF1 →+0.367+0.241<.001<.00134
HNSCC1orf210 →+1.183+0.297<.001<.00134
BRCACXCL12 →-1.242-0.277<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,816 associations by consensus.

BSDC1 vs PSMB2 — OV

Per-sample scatter of BSDC1 vs PSMB2 in OV (Pearson r = 0.27).

Explore this scatter interactively →

Exploration