BRMS1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BRMS1 mutation is significantly associated with the total protein of many other genes, with 6 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BRMS1-associated genes across cancer lineages are GSK-3a-b_pS21_S9, STAT3_pY705, and ASNS. Each is linked with BRMS1 in more than 1 cancer types. Because this analysis shows association rather than direction, both BRMS1-to-partner and partner-to-BRMS1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GSK-3a-b_pS21_S9 grouped by BRMS1-low versus BRMS1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BRMS1→partner) and Y-score (partner→BRMS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECGSK-3a-b_pS21_S9 →+0.575+3.321.010.01031
UCECSTAT3_pY705 →-0.438-2.999.001.03531
UCECASNS →+0.514+2.999.006.03531
UCECAkt_pT308 →+0.877+3.321.007.01012
UCECTuberin_pT1462 →+0.490+3.179<.001.01021
UCECTuberin →+0.460+3.321.001.01021
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

GSK-3a-b_pS21_S9 by BRMS1 expression — UCEC

Box plot of GSK-3a-b_pS21_S9 in BRMS1-low vs BRMS1-high samples in UCEC.

Explore this box plot interactively →

Exploration