BPTF

Across TCGA cell cohorts, BPTF RNA expression is significantly associated with the RNA expression of many other genes, with 13,024 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible BPTF-associated genes across cancer lineages are CEP95, GGA3, and C17orf80. Each is linked with BPTF in more than 19 cancer types. Because this analysis shows association rather than direction, both BPTF-to-partner and partner-to-BPTF results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BPTF versus CEP95 in BREAST, with a Pearson correlation of 0.52.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BPTF→partner) and Y-score (partner→BPTF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BREAST	CEP95 →	+1.231	+1.391	<.001	<.001	3	20
BONE	GGA3 →	+1.064	+0.985	<.001	<.001	3	20
OESOPHAGUS	C17orf80 →	+1.044	+0.888	<.001	.001	3	20
LUNG_NSCLC_LUSC	UBE2O →	+1.224	+1.132	<.001	<.001	3	19
BLOOD_Myeloma	EXOC7 →	+1.214	+0.864	<.001	<.001	3	19
LUNG_NSCLC_LUSC	DDX42 →	+0.857	+1.188	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,024 associations by consensus.

BPTF vs CEP95 — BREAST

Explore this scatter interactively →