BPHL

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BPHL protein abundance is significantly associated with the RNA expression of many other genes, with 10,488 significant associations in total. COAD shows the largest number of these associations.

The most reproducible BPHL-associated genes across cancer lineages are CD69, IL18RAP, and CD244. Each is linked with BPHL in more than 4 cancer types. Because this analysis shows association rather than direction, both BPHL-to-partner and partner-to-BPHL results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BPHL versus CD69 in LSCC, with a Pearson correlation of -0.46.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BPHL→partner) and Y-score (partner→BPHL) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCCD69 →-1.114-0.525<.001<.00135
LSCCIL18RAP →-1.017-0.630<.001<.00135
BRCACD244 →-0.714-0.603<.001<.00135
UCECGMFG →-1.060-0.444<.001<.00135
BRCAGIMAP6 →-0.687-0.331<.001.00135
LSCCSTX11 →-0.655-0.547<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,488 associations by consensus.

BPHL vs CD69 — LSCC

Per-sample scatter of BPHL vs CD69 in LSCC (Pearson r = -0.46).

Explore this scatter interactively →

Exploration