BOP1

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, BOP1 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,235 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible BOP1-associated GO terms across cancer lineages are rRNA metabolic process, Ribosome biogenesis, and Nucleosome disassembly. Each is linked with BOP1 in more than 17 cancer types. Because this analysis shows association rather than direction, both BOP1-to-partner and partner-to-BOP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, rRNA metabolic process grouped by BOP1-low versus BOP1-high in LUNG_SCLC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (BOP1→partner) and Y-score (partner→BOP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCrRNA metabolic process →+0.148+0.909<.001<.001318
LUNG_SCLCRibosome biogenesis →+0.129+0.913<.001<.001317
BONENucleosome disassembly →+0.174+1.557.001<.001317
BONEProtein-DNA complex disassembly →+0.157+1.568.003<.001317
LUNG_SCLCRibosomal small subunit biogenesis →+0.128+0.696<.001<.001317
LUNG_SCLCRibosome assembly →+0.097+0.850<.001<.001316
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,235 associations by consensus.

rRNA metabolic process by BOP1 expression — LUNG_SCLC

Box plot of rRNA metabolic process in BOP1-low vs BOP1-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration