BNIP3

RNA expression — cross-omics
Cross-omicsRNA → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, BNIP3 RNA expression is significantly associated with the RNA expression of many other genes, with 7,090 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible BNIP3-associated genes across cancer lineages are PDK1, FUT11, and PFKFB4. Each is linked with BNIP3 in more than 12 cancer types. Because this analysis shows association rather than direction, both BNIP3-to-partner and partner-to-BNIP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BNIP3 versus PDK1 in LIVER, with a Pearson correlation of 0.47.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BNIP3→partner) and Y-score (partner→BNIP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LIVERPDK1 →+1.706+1.833<.001.002313
KIDNEYFUT11 →+1.741+2.323<.001<.001311
KIDNEYPFKFB4 →+2.114+2.127<.001<.001311
URINARY_TRACTPGAM1 →+1.548+3.693<.001<.001310
BLOOD_LymphomaPGK1 →+1.211+2.020<.001<.001211
OVARYP4HA1 →+1.775+2.335<.001<.001310
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,090 associations by consensus.

BNIP3 vs PDK1 — LIVER

Per-sample scatter of BNIP3 vs PDK1 in LIVER (Pearson r = 0.47).

Explore this scatter interactively →

Exploration