BNIP1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BNIP1 protein abundance is significantly associated with the RNA expression of many other genes, with 11,590 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible BNIP1-associated genes across cancer lineages are TBL1X, NES, and DNAJC13. Each is linked with BNIP1 in more than 3 cancer types. Because this analysis shows association rather than direction, both BNIP1-to-partner and partner-to-BNIP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BNIP1 versus TBL1X in HNSC, with a Pearson correlation of -0.26.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BNIP1→partner) and Y-score (partner→BNIP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCTBL1X →-0.720-0.190<.001<.00134
COADNES →-1.048-0.266<.001<.00134
UCECDNAJC13 →-0.366-0.425<.001<.00134
UCECCLSTN1 →-0.439-0.371.001.00134
CCRCCARMCX4 →-0.516-0.370<.001<.00134
UCECPIBF1 →-0.383-0.325<.001.00334
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,590 associations by consensus.

BNIP1 vs TBL1X — HNSC

Per-sample scatter of BNIP1 vs TBL1X in HNSC (Pearson r = -0.26).

Explore this scatter interactively →

Exploration