BNIP1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BNIP1 mutation is significantly associated with the RNA expression of many other genes, with 1,913 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BNIP1-associated genes across cancer lineages are CCT5, NTAN1, and STEAP1. Each is linked with BNIP1 in more than 1 cancer types. Because this analysis shows association rather than direction, both BNIP1-to-partner and partner-to-BNIP1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCT5 grouped by BNIP1-low versus BNIP1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BNIP1→partner) and Y-score (partner→BNIP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCCT5 →+0.557+2.639.005.00532
UCECNTAN1 →+0.616+2.556<.001.00132
UCECSTEAP1 →+0.979+3.595.002.00132
UCECCCT2 →+0.622+3.708<.001<.00132
UCECRNA5SP414 →+0.472+2.032<.001.00732
UCECRNA5SP411 →+1.546+2.978<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,913 associations by consensus.

CCT5 by BNIP1 expression — UCEC

Box plot of CCT5 in BNIP1-low vs BNIP1-high samples in UCEC.

Explore this box plot interactively →

Exploration