BMP2K

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BMP2K mutation is significantly associated with the total protein of many other genes, with 31 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BMP2K-associated genes across cancer lineages are JNK2, MSH6, and p90 RSK. Each is linked with BMP2K in more than 1 cancer types. Because this analysis shows association rather than direction, both BMP2K-to-partner and partner-to-BMP2K results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, JNK2 grouped by BMP2K-low versus BMP2K-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BMP2K→partner) and Y-score (partner→BMP2K) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECJNK2 →+0.215+2.115<.001<.00132
UCECMSH6 →-0.321-2.222.002.00932
UCECp90 RSK →+0.139+1.366.020.01032
UCECPDCD4 →-0.381-1.700.010.04032
UCECCaspase-8 →-0.247-2.710.001<.00132
UCECEGFR_pY1068 →-0.218-1.137.005.04131
Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

JNK2 by BMP2K expression — UCEC

Box plot of JNK2 in BMP2K-low vs BMP2K-high samples in UCEC.

Explore this box plot interactively →

Exploration