BMP2

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BMP2 mutation is significantly associated with the total protein of many other genes, with 27 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible BMP2-associated genes across cancer lineages are TIGAR, Di-Ras3, and EGFR_pY1068. Each is linked with BMP2 in more than 1 cancer types. Because this analysis shows association rather than direction, both BMP2-to-partner and partner-to-BMP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TIGAR grouped by BMP2-low versus BMP2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (BMP2→partner) and Y-score (partner→BMP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTIGAR →+0.140+1.441.014.02932
UCECDi-Ras3 →-0.133-3.308.016.00932
UCECEGFR_pY1068 →-0.281-3.459.002.00531
UCECGATA6 →-0.127-1.700.032.04231
UCECJNK2 →+0.194+2.662.009<.00131
UCECKu80 →+0.212+1.778.016.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 27 associations by consensus.

TIGAR by BMP2 expression — UCEC

Box plot of TIGAR in BMP2-low vs BMP2-high samples in UCEC.

Explore this box plot interactively →

Exploration