BMF

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, BMF RNA expression is significantly associated with the protein abundance of many other proteins, with 12,142 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible BMF-associated proteins across cancer lineages are TBC1D2B, CD4, and ELMO2. Each is linked with BMF in more than 4 cancer types. Because this analysis shows association rather than direction, both BMF-to-partner and partner-to-BMF results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, BMF versus TBC1D2B in GBM, with a Pearson correlation of 0.57.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (BMF→partner) and Y-score (partner→BMF) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTBC1D2B →+0.330+0.835<.001<.00135
GBMCD4 →+0.620+0.825<.001<.00135
HNSCELMO2 →+0.258+0.634<.001.00135
GBMABI3 →+0.631+0.830<.001<.00135
UCECNCOA7_S441 →+0.506+0.750<.001<.00134
LSCCPIP4K2A →+0.476+0.702<.001.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,142 associations by consensus.

BMF vs TBC1D2B — GBM

Per-sample scatter of BMF vs TBC1D2B in GBM (Pearson r = 0.57).

Explore this scatter interactively →

Exploration